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Day 59 MCAT Practice Question

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Passage 10: Compound X

It is theorized that a bioactive compound, Compound X, resides within a carnivorous

plant in the Amazon rainforest. Interested in its anticancer properties possibly due

to its unique chemical structure, researchers set out to isolate Compound X from

the plant it was hypothesized to be contained within. However, the compounds’

clear dual affinity for hydrophobic and hydrophilic environments posed a challenge.

Plant material was first collected and dried. Once dried, it was ground into a fine

powder, which was then subjected to the following extraction process to isolate the

compound of interest.

FIGURE

Step 1

Hexane was used as the solvent in which dried plant material was added to for 24

hours. Following extraction, the solvent was evaporated under low pressure, yielding

a crude extract.

Step 2

Minimal ethanol and equal volume of distilled water dissolved the crude extract.

This mixture was transferred to a separatory funnel and the aqueous layer was

removed. To further purify the ethanol-soluble fraction, a series of liquid-liquid

extractions was performed using tetrahydrofuran (THF) and an acidic aqueous

solution. The organic phase was collected and the aqueous phase was discarded;

this step was repeated several times to ensure maximum extraction of Compound X

into the THF layer.

Step 3

Rotary evaporation was utilized on the THF layer to remove the solvent. The semipurified extract that remained was then subjected to distillation. It was at this step

that the researchers decided to restart the process and adjust their method of

distillation because the constituents of the remaining extract had boiling points that

were too close to perform simple distillation. Compound X was then collected.

Step 4

Column chromatography was used to further purify the obtained Compound X.

Fractions were collected and analyzed using thin-layer chromatography (TLC) to

verify the presence of Compound X.

Step 5

The final purified fraction was analyzed with polarimetry. It was observed that no

angle of incident light had any effect on the intensity of light that passed through

the sample. A chiral resolving agent was used to form diastereomeric salts,

which were then separated using recrystallization which yielded the individual

enantiomers of Compound X.

Final Analysis

The resultant enantiomers were characterized using HPLC with a chiral column to

identify any enantiomeric excess. Nuclear magnetic resonance (NMR) spectroscopy

and mass spectrometry (MS) elucidated the structure of Compound X and

vindicated the hypothesized isolation process.
In the extraction procedure, why was an acidic solution used in conjunction

with THF?

A) To protonate Compound X because Compound X is a weak base

B) To alter the conformation of Compound X, increasing solubility in THF

C) To protonate impurities, increasing their solubility in the aqueous layer for

subsequent disposal

D) To deprotonate impurities, increasing their solubility in the aqueous layer for

subsequent disposal
Click to reveal answer
Correct answer: A. THF is the solvent of the organic phase in this

extraction procedure. After this step, Compound X is purified from the organic

phase, indicating that adding acid accomplished the transition from aqueous phase

to organic phase, eliminating choices C and D (chemically adjusting impurities is not

the goal of this step). If Compound X is a weak base, it exists as a charged molecule

in the aqueous phase, but adding acid protonates it and removes the negative

charge, making it more soluble in the organic phase. Answer choice B is incorrect

because altering the three-dimensional structure of a compound generally does

not dramatically change its solubility (certainly not as much as protonation).
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